# called items with site.data.odrs - short-name: SASDB name: Small Angle Scattering Biological Data Bank description: "SASBDB is a curated repository of freely accessible and fully searchable SAS experimental data, which are deposited together with the relevant experimental conditions, sample details, instrument characteristic and derived models. The quality of deposited experimental data and the accuracy of models obtained from SAS and complementary techniques is assessed by the site developers." link: https://www.sasbdb.org/ pic: https://www.sasbdb.org/media/sasbdb-logo.png api: https://www.sasbdb.org/rest-api/docs/ technique: - IRI: http://purl.org/pan-science/PaNET/PaNET01124 name: small angle scattering access: free - short-name: PED name: Protein Ensemble Database link: https://proteinensemble.org/ pic: https://proteinensemble.org/assets/logos/PED_logo_blue.svg description: "PED is a platform for the intrinsically disordered proteins (IDP) community where ensembles and their corresponding primary data can be stored and used as benchmarking datasets to facilitate the development of new ensemble calculation methods." api: https://proteinensemble.org/api - short-name: AlphaFold name: Protein Structure Database link: https://www.alphafold.ebi.ac.uk/ description: "AlphaFold, the state-of-the-art AI system developed by DeepMind, is able to computationally predict protein structures with unprecedented accuracy and speed. Working in partnership with EMBL’s European Bioinformatics Institute (EMBL-EBI), we’ve released over 200 million protein structure predictions by AlphaFold that are freely and openly available to the global scientific community. Included are nearly all catalogued proteins known to science – with the potential to increase humanity’s understanding of biology by orders of magnitude." api: https://www.alphafold.ebi.ac.uk/api-docs data-license: CC-BY-4.0 - short-name: wwPDB name: Protein Data Bank link: https://www.wwpdb.org/ pic: https://cdn.rcsb.org/wwpdb/img/core/wwpdb-logo.png description: "Since 1971, the Protein Data Bank archive (PDB) has served as the single repository of information about the 3D structures of proteins, nucleic acids, and complex assemblies." data-license: CC0-1.0 - short-name: EMDB name: Electron Microscopy Data Bank link: https://www.ebi.ac.uk/emdb/ pic: https://www.ebi.ac.uk/em_static/images/emdb/EMBD_logo_2017_light_background.png description: "EMDB (the Electron Microscopy Data Bank) is a public repository for electron cryo-microscopy maps and tomograms of macromolecular complexes and subcellular structures. It covers a variety of techniques, including single-particle analysis, electron tomography, sub-tomogram averaging, fibre diffraction and electron crystallography." api: https://www.ebi.ac.uk/emdb/api/ technique: - IRI: http://purl.org/pan-science/PaNET/PaNET01145 name: electron microscopy access: free - short-name: BMRB name: Biological Magnetic Resonance Bank link: https://bmrb.io/ pic: https://bmrb.io/images/BMRB_logo_text.svg description: "BMRB makes bio-NMR data FAIR. It collects, annotates, archives, and disseminates spectral and quantitative data derived from NMR spectroscopic investigations of biological macromolecules and metabolites." api: https://github.com/bmrb-io/BMRB-API - short-name: Human Organ Atlas name: Human Organ Atlas link: https://human-organ-atlas.esrf.eu/ description: "The Human Organ Atlas is making Hierarchical Phase-Contrast Tomography (HiP-CT) 3D scans of entire organs, with ca. 20 micron voxels, open access." data-license: CC-BY-4.0 access: free - short-name: TomoBank name: X-Ray Tomography Data Bank link: https://tomobank.readthedocs.io/en/latest/index.html description: "The X-ray Tomography Data Bank or TomoBank, provides a repository of experimental and simulated data sets with the aim to foster collaboration among computational scientists, beamline scientists and experimentalists, to accelerate the development of tomographic reconstruction and 3D visualization methods and to speed up their implementation in the various synchrotron facility data analysis software packages." data-license: CC-BY-4.0 with exceptions technique: - IRI: http://purl.org/pan-science/PaNET/PaNET01129 name: tomography access: free - short-name: CSD name: Cambridge Structural Database link: https://www.ccdc.cam.ac.uk/solutions/software/csd/ pic: https://www.ccdc.cam.ac.uk/media/CSD.png description: "The Cambridge Structural Database, or CSD, has been curated since 1965 from the published literature, direct deposition, and sources such as patents and PhD theses.<br> The world’s largest database of small-molecule organic and metal-organic crystal structure data, the CSD is managed by the Cambridge Crystallographic Data Centre (CCDC)." coretrustseal: yes technique: - IRI: http://purl.org/pan-science/PaNET/PaNET01082 name: crystallography access: subscription-based