Simplified env.yaml

environment.yaml

@@ -4,332 +4,47 @@
 name: elbextreme
 channels:
   - conda-forge
-  - defaults
 dependencies:
-  - _r-mutex=1.0.1=anacondar_1
-  - archspec=0.2.3=pyhd8ed1ab_0
-  - aws-c-auth=0.7.22=h8a62e84_10
-  - aws-c-cal=0.7.1=h94d0942_1
-  - aws-c-common=0.9.23=h99b78c6_0
-  - aws-c-compression=0.2.18=h94d0942_7
-  - aws-c-event-stream=0.4.2=hb74cd8f_15
-  - aws-c-http=0.8.2=had1507a_6
-  - aws-c-io=0.14.10=hcdb10ff_1
-  - aws-c-mqtt=0.10.4=h856d8ab_8
-  - aws-c-s3=0.6.0=ha9fd6de_2
-  - aws-c-sdkutils=0.1.16=h94d0942_3
-  - aws-checksums=0.1.18=h94d0942_7
-  - aws-crt-cpp=0.27.3=h9d3339c_2
-  - aws-sdk-cpp=1.11.329=he6360a2_9
-  - azure-core-cpp=1.13.0=hd01fc5c_0
-  - azure-identity-cpp=1.8.0=h13ea094_2
-  - azure-storage-blobs-cpp=12.12.0=hfde595f_0
-  - azure-storage-common-cpp=12.7.0=hcf3b6fd_1
-  - blosc=1.21.6=h5499902_0
-  - boltons=24.0.0=pyhd8ed1ab_0
-  - brotli-python=1.1.0=py312h9f69965_1
-  - bwidget=1.9.14=hce30654_1
-  - bzip2=1.0.8=h99b78c6_7
-  - c-ares=1.33.0=h99b78c6_0
-  - ca-certificates=2024.7.4=hf0a4a13_0
-  - cairo=1.18.0=hb4a6bf7_3
-  - cctools=986=h4c9edd9_3
-  - cctools_osx-arm64=986=hf2da8af_3
-  - certifi=2024.7.4=pyhd8ed1ab_0
-  - cffi=1.17.0=py312h80c9ed6_0
-  - cfitsio=4.4.1=h793ed5c_0
-  - cftime=1.6.4=py312hbebd99a_0
-  - charset-normalizer=3.3.2=pyhd8ed1ab_0
-  - clang=18.1.8=default_h675cc0c_2
-  - clang-18=18.1.8=default_h5c12605_2
-  - clang_impl_osx-arm64=18.1.8=h2ae9ea5_19
-  - clang_osx-arm64=18.1.8=h54d7cd3_19
-  - clangxx=18.1.8=default_h675cc0c_2
-  - clangxx_impl_osx-arm64=18.1.8=h555f467_19
-  - clangxx_osx-arm64=18.1.8=h54d7cd3_19
-  - cmake=3.30.2=had79d8f_0
-  - colorama=0.4.6=pyhd8ed1ab_0
-  - compiler-rt=18.1.8=h28df8ea_0
-  - compiler-rt_osx-arm64=18.1.8=h56c4e69_0
-  - conda=24.7.1=py312h81bd7bf_0
-  - conda-libmamba-solver=24.7.0=pyhd8ed1ab_0
-  - conda-package-handling=2.3.0=pyh7900ff3_0
-  - conda-package-streaming=0.10.0=pyhd8ed1ab_0
-  - curl=8.9.1=hbf5303f_0
-  - distro=1.9.0=pyhd8ed1ab_0
-  - expat=2.6.2=hebf3989_0
-  - fmt=10.2.1=h2ffa867_0
-  - font-ttf-dejavu-sans-mono=2.37=hab24e00_0
-  - font-ttf-inconsolata=3.000=h77eed37_0
-  - font-ttf-source-code-pro=2.038=h77eed37_0
-  - font-ttf-ubuntu=0.83=h77eed37_2
-  - fontconfig=2.14.2=h82840c6_0
-  - fonts-conda-ecosystem=1=0
-  - fonts-conda-forge=1=0
-  - freetype=2.12.1=hadb7bae_2
-  - freexl=2.0.0=hfbad9fb_0
-  - fribidi=1.0.10=h27ca646_0
-  - frozendict=2.4.4=py312h7e5086c_0
-  - geos=3.12.2=h00cdb27_1
-  - geotiff=1.7.3=h7e5fb84_2
-  - gfortran=12.3.0=h1ca8e4b_1
-  - gfortran_impl_osx-arm64=12.3.0=h53ed385_3
-  - gfortran_osx-arm64=12.3.0=h57527a5_1
-  - giflib=5.2.2=h93a5062_0
-  - gmp=6.3.0=h7bae524_2
-  - graphite2=1.3.13=hebf3989_1003
-  - gsl=2.7=h6e638da_0
-  - h2=4.1.0=pyhd8ed1ab_0
-  - harfbuzz=9.0.0=h997cde5_1
-  - hdf4=4.2.15=h2ee6834_7
-  - hdf5=1.14.3=mpi_mpich_hb65fe4a_5
-  - hpack=4.0.0=pyh9f0ad1d_0
-  - hyperframe=6.0.1=pyhd8ed1ab_0
-  - icu=75.1=hfee45f7_0
-  - idna=3.7=pyhd8ed1ab_0
-  - isl=0.26=imath32_h347afa1_101
-  - json-c=0.17=he54c16a_1
-  - jsonpatch=1.33=pyhd8ed1ab_0
-  - jsonpointer=3.0.0=py312h81bd7bf_0
-  - kealib=1.5.3=h848a2d4_1
-  - krb5=1.21.3=h237132a_0
-  - lcms2=2.16=ha0e7c42_0
-  - ld64=711=h4c6efb1_3
-  - ld64_osx-arm64=711=h5ecc89c_3
-  - lerc=4.0.0=h9a09cb3_0
-  - libabseil=20240116.2=cxx17_h00cdb27_1
-  - libaec=1.1.3=hebf3989_0
-  - libarchive=3.7.4=h83d404f_0
-  - libasprintf=0.22.5=h8414b35_3
-  - libblas=3.9.0=23_osxarm64_openblas
-  - libcblas=3.9.0=23_osxarm64_openblas
-  - libclang-cpp18.1=18.1.8=default_h5c12605_2
-  - libcrc32c=1.1.2=hbdafb3b_0
-  - libcurl=8.9.1=hfd8ffcc_0
-  - libcxx=18.1.8=h5a72898_4
-  - libdeflate=1.21=h99b78c6_0
-  - libedit=3.1.20191231=hc8eb9b7_2
-  - libev=4.33=h93a5062_2
-  - libexpat=2.6.2=hebf3989_0
-  - libffi=3.4.2=h3422bc3_5
-  - libgdal=3.9.2=hce30654_0
-  - libgdal-core=3.9.2=h6decb56_0
-  - libgdal-fits=3.9.2=h7a7a030_0
-  - libgdal-grib=3.9.2=hdd4b840_0
-  - libgdal-hdf4=3.9.2=h94124bd_0
-  - libgdal-hdf5=3.9.2=hf90b89a_0
-  - libgdal-jp2openjpeg=3.9.2=h54bcb16_0
-  - libgdal-kea=3.9.2=hacb1b3e_0
-  - libgdal-netcdf=3.9.2=h1723b65_0
-  - libgdal-pdf=3.9.2=h7ee6820_0
-  - libgdal-pg=3.9.2=h7d28298_0
-  - libgdal-postgisraster=3.9.2=h7d28298_0
-  - libgdal-tiledb=3.9.2=h6fe8b47_0
-  - libgdal-xls=3.9.2=hb39617b_0
-  - libgettextpo=0.22.5=h8414b35_3
-  - libgfortran=5.0.0=13_2_0_hd922786_3
-  - libgfortran-devel_osx-arm64=12.3.0=hc62be1c_3
-  - libgfortran5=13.2.0=hf226fd6_3
-  - libglib=2.80.3=h59d46d9_2
-  - libgoogle-cloud=2.26.0=hfe08963_0
-  - libgoogle-cloud-storage=2.26.0=h1466eeb_0
-  - libgrpc=1.62.2=h9c18a4f_0
-  - libiconv=1.17=h0d3ecfb_2
-  - libintl=0.22.5=h8414b35_3
-  - libjpeg-turbo=3.0.0=hb547adb_1
-  - libkml=1.3.0=h00ed6cc_1020
-  - liblapack=3.9.0=23_osxarm64_openblas
-  - libllvm18=18.1.8=h5090b49_2
-  - libmamba=1.5.8=h90c426b_0
-  - libmambapy=1.5.8=py312h344e357_0
-  - libnetcdf=4.9.2=mpi_mpich_hf75f9b5_14
-  - libnghttp2=1.58.0=ha4dd798_1
-  - libopenblas=0.3.27=openmp_h517c56d_1
-  - libpnetcdf=1.13.0=mpi_mpich_h0f1c85a_101
-  - libpng=1.6.43=h091b4b1_0
-  - libpq=16.4=h7afe498_0
-  - libprotobuf=4.25.3=hbfab5d5_0
-  - libre2-11=2023.09.01=h7b2c953_2
-  - librttopo=1.1.0=h31fb324_16
-  - libsolv=0.7.30=h6c9b7f8_0
-  - libspatialite=5.1.0=hf7a34df_9
-  - libsqlite=3.46.0=hfb93653_0
-  - libssh2=1.11.0=h7a5bd25_0
-  - libtiff=4.6.0=hf8409c0_4
-  - libudunits2=2.2.28=h5f3f34b_3
-  - libuv=1.48.0=h93a5062_0
-  - libwebp-base=1.4.0=h93a5062_0
-  - libxml2=2.12.7=h01dff8b_4
-  - libzip=1.10.1=ha0bc3c6_3
-  - libzlib=1.3.1=hfb2fe0b_1
-  - llvm-openmp=18.1.8=hde57baf_1
-  - llvm-tools=18.1.8=h5090b49_2
-  - llvm-tools-18=18.1.8=h5090b49_2
-  - lz4-c=1.9.4=hb7217d7_0
-  - lzo=2.10=h93a5062_1001
-  - make=4.3=he57ea6c_1
-  - mamba=1.5.8=py312h14bc7db_0
-  - menuinst=2.1.2=py312h81bd7bf_0
-  - minizip=4.0.7=h27ee973_0
-  - mosh=1.4.0=pl5321h54a41c2_8
-  - mpc=1.3.1=h91ba8db_0
-  - mpfr=4.2.1=h1cfca0a_2
-  - mpi=1.0=mpich
-  - mpich=4.2.2=h9ee2227_101
-  - ncurses=6.5=hb89a1cb_0
-  - netcdf-fortran=4.6.1=mpi_mpich_hf3c9fff_4
-  - netcdf4=1.7.1=nompi_py312hec02768_101
-  - nspr=4.35=hb7217d7_0
-  - nss=3.103=hc42bcbf_0
-  - numpy=2.1.0=py312hb544834_0
-  - openjpeg=2.5.2=h9f1df11_0
-  - openssl=3.3.1=h8359307_3
-  - packaging=24.1=pyhd8ed1ab_0
-  - pango=1.54.0=h9ee27a3_2
-  - parallelio=2.6.3=mpi_mpich_h24e929f_100
-  - pcre2=10.44=h297a79d_2
-  - perl=5.32.1=7_h4614cfb_perl5
-  - pip=24.2=pyhd8ed1ab_0
-  - pixman=0.43.4=hebf3989_0
-  - platformdirs=4.2.2=pyhd8ed1ab_0
-  - pluggy=1.5.0=pyhd8ed1ab_0
-  - poppler=24.08.0=h9787579_0
-  - poppler-data=0.4.12=hd8ed1ab_0
-  - postgresql=16.4=h2cc7dc1_0
-  - proj=9.4.1=hfb94cee_1
-  - pybind11-abi=4=hd8ed1ab_3
-  - pycosat=0.6.6=py312h02f2b3b_0
-  - pycparser=2.22=pyhd8ed1ab_0
-  - pysocks=1.7.1=pyha2e5f31_6
-  - python=3.12.5=h30c5eda_0_cpython
-  - python_abi=3.12=5_cp312
-  - pyyaml=6.0.2=py312h7e5086c_0
-  - r=4.3=r43hd8ed1ab_1008
-  - r-assertthat=0.2.1=r43hc72bb7e_5
-  - r-base=4.3.3=h11bd7ca_14
-  - r-boot=1.3_30=r43hc72bb7e_2
-  - r-brio=1.1.5=r43h07cda29_1
-  - r-callr=3.7.6=r43hc72bb7e_1
-  - r-class=7.3_22=r43h07cda29_2
-  - r-classint=0.4_10=r43h7807725_1
-  - r-cli=3.6.3=r43hd76f289_1
-  - r-cluster=2.1.6=r43h7807725_1
-  - r-cmocean=0.3_1=r43h142f84f_0
-  - r-codetools=0.2_20=r43hc72bb7e_1
-  - r-colorspace=2.1_1=r43h07cda29_0
-  - r-cpp11=0.4.7=r43hc72bb7e_1
-  - r-crayon=1.5.3=r43hc72bb7e_1
-  - r-dbi=1.2.3=r43hc72bb7e_1
-  - r-desc=1.4.3=r43hc72bb7e_1
-  - r-diffobj=0.3.5=r43h07cda29_3
-  - r-digest=0.6.37=r43hd76f289_0
-  - r-e1071=1.7_14=r43hd76f289_1
-  - r-ellipsis=0.3.2=r43h07cda29_3
-  - r-evaluate=0.24.0=r43hc72bb7e_1
-  - r-fansi=1.0.6=r43h07cda29_1
-  - r-farver=2.1.2=r43hd76f289_1
-  - r-foreign=0.8_87=r43h07cda29_1
-  - r-fs=1.6.4=r43hd76f289_1
-  - r-generics=0.1.3=r43hc72bb7e_3
-  - r-glue=1.7.0=r43h07cda29_1
-  - r-gsw=1.2_0=r43hf400cd2_0
-  - r-jsonlite=1.8.8=r43h07cda29_1
-  - r-kernsmooth=2.23_24=r43h30ed03b_1
-  - r-labeling=0.4.3=r43hc72bb7e_1
-  - r-latex2exp=0.9.6=r43hc72bb7e_2
-  - r-lattice=0.22_6=r43h07cda29_1
-  - r-lifecycle=1.0.4=r43hc72bb7e_1
-  - r-lubridate=1.9.3=r43h07cda29_1
-  - r-magrittr=2.0.3=r43h07cda29_3
-  - r-mass=7.3_60.0.1=r43h07cda29_1
-  - r-matrix=1.6_5=r43hded8dfa_1
-  - r-mgcv=1.9_1=r43h83b88f1_1
-  - r-munsell=0.5.1=r43hc72bb7e_1
-  - r-ncdf4=1.23=r43h140e699_0
-  - r-nlme=3.1_165=r43h7807725_1
-  - r-nnet=7.3_19=r43h07cda29_2
-  - r-oce=1.8_3=r43h97112e6_0
-  - r-pacman=0.5.1=r43hc72bb7e_3
-  - r-pillar=1.9.0=r43hc72bb7e_2
-  - r-pkgbuild=1.4.4=r43hc72bb7e_1
-  - r-pkgconfig=2.0.3=r43hc72bb7e_4
-  - r-pkgload=1.4.0=r43hc72bb7e_0
-  - r-praise=1.0.0=r43hc72bb7e_1008
-  - r-prettyunits=1.2.0=r43hc72bb7e_1
-  - r-processx=3.8.4=r43h07cda29_1
-  - r-proxy=0.4_27=r43h07cda29_3
-  - r-ps=1.7.7=r43h07cda29_0
-  - r-r6=2.5.1=r43hc72bb7e_3
-  - r-rcolorbrewer=1.1_3=r43h785f33e_3
-  - r-rcpp=1.0.13=r43hd76f289_0
-  - r-recommended=4.3=r43hd8ed1ab_1007
-  - r-rematch2=2.1.2=r43hc72bb7e_4
-  - r-remotes=2.5.0=r43hc72bb7e_1
-  - r-rlang=1.1.4=r43hd76f289_1
-  - r-rpart=4.1.23=r43h07cda29_1
-  - r-rprojroot=2.0.4=r43hc72bb7e_1
-  - r-s2=1.1.7=r43h860579f_0
-  - r-scales=1.3.0=r43hc72bb7e_1
-  - r-sf=1.0_16=r43he0f40e3_8
-  - r-spatial=7.3_17=r43h07cda29_1
-  - r-stringi=1.8.4=r43h428a9ab_3
-  - r-stringr=1.5.1=r43h785f33e_1
-  - r-survival=3.7_0=r43h07cda29_1
-  - r-teachingdemos=2.13=r43hc72bb7e_1
-  - r-testthat=3.2.1.1=r43hd76f289_1
-  - r-tibble=3.2.1=r43h07cda29_3
-  - r-timechange=0.3.0=r43hd76f289_1
-  - r-units=0.8_5=r43hd76f289_1
-  - r-utf8=1.2.4=r43h07cda29_1
-  - r-vctrs=0.6.5=r43hd76f289_1
-  - r-viridislite=0.4.2=r43hc72bb7e_2
-  - r-waldo=0.5.2=r43hc72bb7e_1
-  - r-withr=3.0.1=r43hc72bb7e_0
-  - r-wk=0.9.2=r43hd76f289_1
-  - re2=2023.09.01=h4cba328_2
-  - readline=8.2=h92ec313_1
-  - reproc=14.2.4.post0=h93a5062_1
-  - reproc-cpp=14.2.4.post0=h965bd2d_1
-  - requests=2.32.3=pyhd8ed1ab_0
-  - rhash=1.4.4=hb547adb_0
-  - ruamel.yaml=0.18.6=py312he37b823_0
-  - ruamel.yaml.clib=0.2.8=py312he37b823_0
-  - setuptools=72.1.0=pyhd8ed1ab_0
-  - sigtool=0.1.3=h44b9a77_0
-  - six=1.16.0=pyh6c4a22f_0
-  - snappy=1.2.1=hd02b534_0
-  - spdlog=1.14.1=h9c441cc_0
-  - sqlite=3.46.0=h5838104_0
-  - tapi=1100.0.11=he4954df_0
-  - tiledb=2.25.0=h5123ab7_3
-  - tk=8.6.13=h5083fa2_1
-  - tktable=2.10=h1e387b8_6
-  - tornado=6.4.1=py312h7e5086c_0
-  - tqdm=4.66.5=pyhd8ed1ab_0
-  - truststore=0.8.0=pyhd8ed1ab_0
-  - tzcode=2024a=h93a5062_0
-  - tzdata=2024a=h0c530f3_0
-  - uriparser=0.9.8=h00cdb27_0
-  - urllib3=2.2.2=pyhd8ed1ab_1
-  - wheel=0.44.0=pyhd8ed1ab_0
-  - xerces-c=3.2.5=h0a46525_1
-  - xmlstore=0.9.14=pyhd8ed1ab_0
-  - xz=5.2.6=h57fd34a_0
-  - yaml=0.2.5=h3422bc3_2
-  - yaml-cpp=0.8.0=h13dd4ca_0
-  - zlib=1.3.1=hfb2fe0b_1
-  - zstandard=0.23.0=py312h721a963_0
-  - zstd=1.5.6=hb46c0d2_0
+  - cmake
+  - fontconfig
+  - geos
+  - geotiff
+  - gfortran
+  - hdf5
+  - libnetcdf
+  - mpich
+  - netcdf-fortran
+  - netcdf4
+  - numpy
+  - pip
+  - python=3.12
+  - pyyaml
+  - r-base
+  - r-cluster
+#  - r-cmocean  # seems not available in conda-forge channel
+  - r-colorspace
+  - r-latex2exp
+  - r-matrix
+  - r-ncdf4
+  - r-pacman
+  - r-pillar
+  - r-rcolorbrewer
+  - r-sf
+  - r-spatial
+  - r-stringi
+  - r-stringr
+  - r-teachingdemos
+  - sqlite
+  - xerces-c
+  - xmlstore
+  - yaml-cpp
+  - fonttools
+  - kiwisolver
+  - matplotlib
+  - pillow
+  - pyparsing
+  - python-dateutil
+  - xmlplot
   - pip:
-      - contourpy==1.2.1
-      - cycler==0.12.1
-      - editscenario==0.11.7
-      - fonttools==4.53.1
-      - gotmgui==0.1.2
-      - kiwisolver==1.4.5
-      - matplotlib==3.9.2
-      - pillow==10.4.0
-      - pyparsing==3.1.2
-      - python-dateutil==2.9.0.post0
-      - xmlplot==0.9.29
-    
\ No newline at end of file
+      - editscenario
+      - gotmgui
\ No newline at end of file