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Together towards interoperable semantics in the electron microscopies

A Python Library to enable configurable device instantiation based on HAPPI

We strive to make marine images FAIR. We maintain data profiles to establish terms for marine imagery and we develop standard operating procedures for handling marine images and software tools to apply the vocabulary and procedures to marine imagery.

sms_interface provides a Python interface for the API of the Sensor Management System (SMS).

Tree Crown Segmentation and Analysis in Remote Sensing Imagery with PyTorch -- https://deeptrees.de

The Elbe Oxygen Early Information System "ElbOxy-EIS" is a prototype automated and open source early information system for low oxygen (hypoxia) events along the river Elbe.

Example project used in this workshop. It is an adapted version from another workshop. The original project can be found here.

Set of tools to harvest, process and uplift (meta)data from metadata providers within the Helmholtz association to be included in the Helmholtz Knowledge Graph (Helmholtz-KG). The harvested linked data in the form of schema.org jsonld is aggregated and uplifted in data pipelines to be included into a single large knowledge graph (KG). The tool set and harvesters can be used as a python library or over a commandline interface (CLI, hmc-unhide). Provenance of metadata changes is tracked rudimentary by saving graph patches of changes on rdflib Graph data structures on the semantic triple level. Harvesters support extracting data via sitemap, gitlab API, datacite API and OAI-PMH endpoints.