Design and implement UI transactions for connections between data entities for the OMERO data

This is the UI layer issue for data_harvesting#78

From OMERO images, I get two types of entities now: Image and Imaging Instrument (Microscope + Detector + Objective).

Ideas for more connectedness in the data:

• connect images and the instruments involved in their creation
• connect image owner name / research group to the "Institute" and "Experts"
• create Datasets / Projects for images in unHIDE to represent OMERO Datasets / Projects
• connect images to the publications
• extract sematic entities from text (using ontologies / Named Entity Recognition), and use them to connect the data

added enhancement + 1 deleted label

assigned to @gabriel.preuss

Personally, I believe semantic extraction might be worthwhile, but more "technical" things like instrument - image connection are a low-hanging fruit.

@gabriel.preuss assigning you because it seems that something like this would be most suited to your area of expertise

marked this issue as related to #81

marked this issue as related to #106

Triple store too slow for the UI timescale.

Add PID to SOLR objects to link them PID based.

Fiona working on a similar thing in #81.

This problem is to be solved at the data pipeline level. With how data and connections are indexed. And as such, belongs to the data harvesting repository.

Currently the connections between records is not appropriately indexed which makes it quite challenging to actually show connectedness in any data, OMERO being one of them. However, the team is aware of this and is currently working on figuring out a solution for this at the data pipeline level. Please move this issue to the data harvesting repository!

See #81 (comment 6779929). I will adjust this issue to reflect the needed changes specifically for the UI component more, and open another issue concerning data layer in the data harvesting repository. Hope it is fine.

unassigned @gabriel.preuss

mentioned in issue #89

mentioned in issue #81

changed title from Increase connectedness of OMERO data to Design and implement UI transactions for connections between data entities for the OMERO data

mentioned in issue data_harvesting#78

changed the description

marked this issue as related to data_harvesting#78

added Discussion label and removed Enhancement + 1 deleted label