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Integration of TotalSegmentator

Stefan Denner requested to merge feature/total-segmentator into develop

Integration of TotalSegmentator as an extension. image

Some additional comments:

  • Added PyRadiomicsOperator POC - currently not configurable.
  • Changed the default behavior of KaapanaBaseOperator, so that /models directory is always mounted (independent of set flags)
  • Removed RACOON code for nifti to segmentation conversion, instead introduced generic default code
  • Introduced a CombineMaskOperator, which merges multiple-single class nifti masks into one multi-class mask
Edited by Stefan Denner

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