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Set of tools to harvest, process and uplift (meta)data from metadata providers within the Helmholtz association to be included in the Helmholtz Knowledge Graph (Helmholtz-KG). The harvested linked data in the form of schema.org jsonld is aggregated and uplifted in data pipelines to be included into a single large knowledge graph (KG). The tool set and harvesters can be used as a python library or over a commandline interface (CLI, hmc-unhide). Provenance of metadata changes is tracked rudimentary by saving graph patches of changes on rdflib Graph data structures on the semantic triple level. Harvesters support extracting data via sitemap, gitlab API, datacite API and OAI-PMH endpoints.
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ROCK-IT / WP2 / structured_metadata
GNU Affero General Public License v3.0Updated -
METABOLATOR / METABOLATOR
Apache License 2.0Analysis of Microcalorimetric Metabolic Data Using Monod's Equation
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COSMOS / neptoon_examples
MIT LicenseUpdated -
Taimur Khan / DeepTrees
MIT LicenseTree Crown Segmentation and Analysis in Remote Sensing Imagery with PyTorch -- https://deeptrees.de
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Fahmy, Prof. Dr. Karim (FWOP) - 1499 / METABOLATOR
Apache License 2.0Analysis of Microcalorimetric Metabolic Data Using Monod's Equation
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Helmholtz Metadata Collaboration / HMC Public / HMC Hub Health / OMExcavator
Apache License 2.0Tools to extract OMERO image metadata as JSON-LD
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